In order to upgrade MySQL version on Direct Admin Server, kindly follow the below given steps ::

First navigate to custombuild folder

1) [root@host]# cd /usr/local/directadmin/custombuild

2) Edit the options.conf file and perform following changes.
******************
mysql=5.5
mysql_inst=yes
mysql_backup=yes
******************
Note :: values can be 5.0, 5.1, 5.3, 5.5

3) save options.conf file and build mysql using following command

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[root@host custombuild]#./build mysql
***********

Thats all………..:)mysql

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